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| T. M. Murali Associate Professor | Office Hours: | MW: 9:30 to 11:30 a.m. | |
T. M. Murali is an associate professor in the Department of Computer Science at Virginia Tech. He is also affiliated with the Genetics, Bioinformatics and Computational Biology graduate programme. Murali's research group develops phenomenological and predictive models dealing with the function, behaviour, and properties of large-scale molecular interaction networks in the cell. He received his undergraduate degree in computer science from the Indian Institute of Technology, Madras and his Sc. M. and Ph. D. degrees from Brown University.
2008
2007
Dyer M.D., Murali T M., Sobral B.W.,
"Computational prediction of host-pathogen protein-protein interactions.",
Bioinformatics, vol. 23, no. 13, Genetics, Bioinformatics and Computational Biology Program, Virginia Polytechnic Institute and State University, Blacksburg, VA 24061, USA. dyermd@vbi.vt.edu, pp. i159-66, 2007.
Abstract
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Murali T M., Rivera C.G.,
"Network Legos: Building Blocks of Cellular Wiring Diagrams",
Proceedings of the Eleventh Annual International Conference on Research in Computational Molecular Biology (RECOMB), pp. 47–61, 2007.
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2006
Li P., Sioson A., Mane S P., Ulanov A., Grothaus G., Heath L S., Murali T M., Bohnert H J., Grene R.,
"Response diversity of Arabidopsis thaliana ecotypes in elevated CO/2 in the field.",
Plant Mol Biol, vol. 62, no. 4-5, pp. 593-609, 2006.
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Pati A., Vasquez-Robinet C., Heath L S., Grene R., Murali T M.,
"XcisClique: Analysis of regulatory bicliques.",
BMC Bioinformatics, vol. 7, no. 1, pp. 218, 2006.
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Li P H., Sioson A., Mane S P., Ulanov A., Grothaus G., Heath L S., Murali T M., Bohnert H J., Grene R.,
"Response Diversity of Arabidopsis thaliana Ecotypes in Elevated [Co2] in the Field",
Plant Molecular Biology, vol. 62, pp. pp. 593-609, 2006.
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Pati A., Vasquez-Robinet C., Heath L.S., Grene R., Murali T M.,
"XcisClique: Analysis of Regulatory Bicliques",
BMC Bioinformatics, vol. 7, pp. 14 pages in main article; plus 16 pages in 7 additional files, 2006.
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2005
Pati A., Vasquez-Robinet C., Heath L.S., Grene R., Murali. T M.,
"XcisClique: Analyzing Regulatory Bicliques in Arabidopsis thaliana (Poster)",
8th Annual Conference on Computational Genomics , Cambridge, MA,, 11/2005.
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2004
Karaoz U., Murali T M., Letovsky S., Zheng Y., Ding C., Cantor C.R., Kasif S.,
"Whole genome annotation using evidence integration in functional linkage networks",
Proceedings of the National Academy of Sciences, pp. 2888–2893, 2004.
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2003
Su Y., Murali T M., Pavlovic V., Schaffer M., Kasif S.,
"RankGene: identification of diagnostic genes based on expression data.",
Bioinformatics, vol. 19, no. 12, pp. 1578–9, 2003.
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2002
Procopiuc C., Jones M., Agarwal P.K., Murali T M.,
"A Monte Carlo algorithm for fast projective clustering",
Proceedings of the 2002 ACM SIGMOD International Conference on Management of Data, pp. 418-427, 2002.
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Efrat A., Guibas L.J., Har-Peled S., Mitchell J.S B., Murali T M.,
"New Similarity Measures between Polylines with Applications to Morphing and Polygon Sweeping",
Discrete & Computational Geometry, vol. 28, no. 4, pp. 535-569, 2002.
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2001
Efrat A., Har-Peled S., Guibas L.J., Murali T M.,
"Morphing between polylines",
Proceedings of the 12th Annual ACM-SIAM Symposium on Discrete Algorithms, pp. 680-689, 2001.
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2000
1999
1998
1997
1996
Agarwal P.K., Grove E.F., Murali T M., Vitter J.,
"Binary Search Partitions for Fat Rectangles",
Proceedings of the 37th IEEE Annual Symposium on Foundations of Computer Science, pp. 482-491, 1996.
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1995