Biblio

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2010
Randhawa, R., C. A. Shaffer, and J. J. Tyson, "Model Composition for Macromolecular Regulatory Networks", IEEE/ACM Transactions on Computational Biology and Bioinformatics, vol. 7, no. 2, pp. 278-287, 2010.
2009
Randhawa, R., C. A. Shaffer, and J. J. Tyson, "Model aggregation: a building-block approach to creating large macromolecular regulatory networks", Bioinformatics, vol. 25, no. 24, pp. 3289-3295, 2009.
Shaffer, C. A., J. W. Zwolak, R. Randhawa, and J. J. Tyson, "Modeling Molecular Regulatory Networks with JigCell and PET", Systems Biology, no. 500: Humana Press, pp. 81-111, 2009.
2008
Wang, P., R. Randhawa, C. A. Shaffer, Y. Cao, and W. T. Baumann, "Converting Macromolecular Regulatory Models from Deterministic to Stochastic Formulation", Proceedings of High Performance Computing and Simulation 2008 (HPCS 2008), pp. 385–392, April, 2008.
2006
Shaffer, C. A., R. Randhawa, and J. J. Tyson, "The role of composition and aggregation in modeling macromolecular regulatory networks", WSC '06: Proceedings of the 38th conference on Winter simulation: Winter Simulation Conference, pp. 1628–1636, 2006.