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Filters: Author is T. M. Murali  [Clear All Filters]
2008
Ruscio J.Z., Kumar D., Shukla M., Prisant M.G., Murali T M., Onufriev A., Atomic level computational identification of ligand migration pathways between solvent and binding site in myoglobin, , (in press ), 2008. Tagged BibTex xml
Jin Y., Murali T M., Ramakrishnan N., "Compositional Mining of Multi-relational Biological Datasets", ACM Transactions on Knowledge Discovery from Data, vol. 2, no. 1, March, 2008. Tagged BibTex xml
Murali T M., Rivera C.G., "Network Legos: Building Blocks of Cellular Wiring Diagrams", Journal of Computational Biology, 2008. Tagged BibTex xml
Dyer M D., Murali T M., Sobral B W., "The landscape of human proteins interacting with viruses and other pathogens.", PLoS Pathog, vol. 4, no. 2, pp. e32, 2008. Abstract Tagged BibTex xml
2007
Dyer M.D., Murali T M., Sobral B.W., "Computational prediction of host-pathogen protein-protein interactions.", Bioinformatics, vol. 23, no. 13, Genetics, Bioinformatics and Computational Biology Program, Virginia Polytechnic Institute and State University, Blacksburg, VA 24061, USA. dyermd@vbi.vt.edu, pp. i159-66, 2007. Abstract Tagged BibTex xml
Shoja V., Murali T M., Zhang L., "Expression Divergence of Tandemly Arrayed Genes in Human and Mouse", Comparative and Functional Genomics, vol. 2007, pp. Article ID 60964, 8 pages, 2007. Tagged BibTex xml
Shoja V., Murali T M., Zhang L., "Expression divergence of tandemly arrayed genes in human and mouse.", Comp Funct Genomics, pp. 60964, 2007. Abstract Tagged BibTex xml
Murali T M., Rivera C.G., "Network Legos: Building Blocks of Cellular Wiring Diagrams", Proceedings of the Eleventh Annual International Conference on Research in Computational Molecular Biology (RECOMB), pp. 47–61, 2007. Tagged BibTex xml
2006
Grothaus G., Mufti A., Murali T M., "Automatic Layout and Visualisation of Biclusters", Algorithms in Molecular Biology, pp. 15, 2006. Tagged BibTex xml
Grothaus G., Mufti A., Murali T M., Zaki M.J., Karypis G., Yang J., "Automatic Layout and Visualisation of Biclusters", Proceedings of the 6th SIGKDD Workshop on Data Mining in Biology, pp. 23–30, 2006. Tagged BibTex xml
Li P., Sioson A., Mane S P., Ulanov A., Grothaus G., Heath L S., Murali T M., Bohnert H J., Grene R., "Response diversity of Arabidopsis thaliana ecotypes in elevated CO/2 in the field.", Plant Mol Biol, vol. 62, no. 4-5, pp. 593-609, 2006. Abstract Tagged BibTex xml
Li P H., Sioson A., Mane S P., Ulanov A., Grothaus G., Heath L S., Murali T M., Bohnert H J., Grene R., "Response Diversity of Arabidopsis thaliana Ecotypes in Elevated [Co2] in the Field", Plant Molecular Biology, vol. 62, pp. pp. 593-609, 2006. Tagged BibTex xml
Murali T M., Wu C., Kasif S., "The Art of Gene Function Prediction", Nature Biotechnology, vol. 12, pp. 1474–1475, 2006. Tagged BibTex xml
Massjouni N., Rivera C., Murali T M., "VIRGO: Computational Prediction of Gene Functions", Nucleic Acids Research, vol. 34, pp. W340–W344, 2006. Tagged BibTex xml
Pati A., Vasquez-Robinet C., Heath L S., Grene R., Murali T M., "XcisClique: Analysis of regulatory bicliques.", BMC Bioinformatics, vol. 7, no. 1, pp. 218, 2006. Abstract Tagged BibTex xml
Pati A., Vasquez-Robinet C., Heath L.S., Grene R., Murali T M., "XcisClique: Analysis of Regulatory Bicliques", BMC Bioinformatics, vol. 7, pp. 14 pages in main article; plus 16 pages in 7 additional files, 2006. Tagged BibTex xml
2004
Wu C., Fu Y., Murali T M., Kasif S., "Gene Expression Module Discovery Using Gibbs Sampling", Genome Informatics, vol. 15, no. 1, pp. 239–248, 2004. Tagged BibTex xml
Karaoz U., Murali T M., Letovsky S., Zheng Y., Ding C., Cantor C.R., Kasif S., "Whole genome annotation using evidence integration in functional linkage networks", Proceedings of the National Academy of Sciences, pp. 2888–2893, 2004. Tagged BibTex xml
2003
Murali T M., Kasif S., "Extracting Conserved Gene Expression Motifs from Gene Expression Data", Proceedings of the Pacific Symposium on Biocomputing, pp. 77–88, 2003. Tagged BibTex xml
Su Y., Murali T M., Pavlovic V., Schaffer M., Kasif S., "RankGene: identification of diagnostic genes based on expression data.", Bioinformatics, vol. 19, no. 12, pp. 1578–9, 2003. Tagged BibTex xml
2002
Procopiuc C., Jones M., Agarwal P.K., Murali T M., "A Monte Carlo algorithm for fast projective clustering", Proceedings of the 2002 ACM SIGMOD International Conference on Management of Data, pp. 418-427, 2002. Tagged BibTex xml
Efrat A., Guibas L.J., Har-Peled S., Mitchell J.S B., Murali T M., "New Similarity Measures between Polylines with Applications to Morphing and Polygon Sweeping", Discrete & Computational Geometry, vol. 28, no. 4, pp. 535-569, 2002. Tagged BibTex xml
2001
Efrat A., Har-Peled S., Guibas L.J., Murali T M., "Morphing between polylines", Proceedings of the 12th Annual ACM-SIAM Symposium on Discrete Algorithms, pp. 680-689, 2001. Tagged BibTex xml
2000
Agarwal P.K., Grove E.F., Murali T M., Vitter J., "Binary Space Partitions for Fat Rectangles", SIAM J. Comput., vol. 29, no. 5, pp. 1422-1448, 2000. Tagged BibTex xml
Agarwal P.K., Guibas L.J., Murali T M., Vitter J., "Cylindrical static and kinetic binary space partitions", Computational Geometry: Theory and Applications, vol. 16, no. 2, pp. 103-127, 2000. Tagged BibTex xml