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Filters: Author is J.J. Tyson  [Clear All Filters]
2007
Randhawa R., Shaffer C A., Tyson J J., "Fusing and Composing Macromolecular Regulatory Network Models", Proceedings of the 2007 High Performance Computing Symposium (HPC 2007), pp. 337–344, March, 2007. Tagged BibTex xml
2006
Panning T D., Watson L T., Allen N A., Shaffer C A., Tyson J J., "Deterministic Global Parameter Estimation for a Budding Yeast Model", Proceedings of the 2006 High Performance Computing Symposium (HPC'06), pp. 195–201, 2006. Tagged BibTex xml
Allen N A., Chen K C., Shaffer C A., Tyson J J., Watson L T., IEE Proceedings – Systems Biology, , vol. 153, no. 1, pp. 13–21, January, 2006. Tagged BibTex xml
Vass M., Shaffer C A., Ramakrishnan N., Watson L T., Tyson J J., "The JigCell Model Builder: A Spreadsheet Interface for Creating Biochemical Reaction Network Models", IEEE/ACM Transactions on Computational Biology and Bioinformatics, vol. Vol. 3, no. 2, pp. 155–164, April-June, 2006. Tagged BibTex xml
2005
Zwolak J W., Tyson J J., Watson L T., "Globally optimized parameters for a model of mitotic control in frog egg extracts", IEE Systems Biol., vol. 152, pp. 81-92, 2005. Tagged BibTex xml
Zwolak J W., Tyson J J., Watson L T., "“Parameter estimation for a mathematical model of the cell cycle in frog eggs", J. Comput. Biology, vol. 12, pp. 48–63, 2005. Tagged BibTex xml
2004
He J., Sosonkina M., Shaffer C A., Tyson J J., Watson L T., Zwolak J W., Meyer J., "A Hierarchical Parallel Scheme for a Global Search Algorithm", Proceedings of the 2004 High Performance Computing Symposium (HPC'04): Society for Modeling and Simulation International, pp. 43–50, 2004. Tagged BibTex xml
Zwolak J W., Tyson J J., Watson L T., "Finding all steady state solutions of chemical kinetic models", Nonlinear Anal.: Real World Appl., vol. 5, pp. 801-814, 2004. Tagged BibTex xml
2003
Zwolak J W., Tyson J J., Watson L T., "Finding all steady state solutions of chemical kinetic models", Proc. High Performance Computing Symposium 2003, I. Banicescu (ed.), Soc. for Modeling and Simulation Internat., San Diego, CA, pp. 47-53, 2003. Tagged BibTex xml
Allen N., Calzone L., Chen K C., Ciliberto A., Ramakrishnan N., Shaffer C A., Sible J C., Tyson J J., Vass M., Watson L T., Zwolak J., "Modeling Regulatory Networks at Virginia Tech", Omics Journal of Integrative Biology, vol. Vol. 7, no. 3, pp. pages 285–300, Fall, 2003. Tagged BibTex xml
2002
Zwolak J W., Tyson J J., Watson L T., "Parameter estimation in a cell cycle model for frog egg extracts", Proc. High Performance Computing Symposium 2002, A. Tentner (ed.), Soc. for Modeling and Simulation Internat., San Diego, CA, pp. 67-74, 2002. Tagged BibTex xml
2001
Zwolak J W., Tyson J J., Watson L T., "Estimating rate constants in cell cycle models", Proc. High Performance Computing Symposium 2001, A. Tentner (ed.), Soc. for Modeling and Simulation Internat., San Diego, CA, pp. 53–57, 2001. Tagged BibTex xml