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"The expected fitness cost of a mutation fixation under the one-dimensional Fisher model",
6th Internat. Symp. on Bioinformatics Research and Appl., vol. LNBI 6053/2010, Springer-Verlag, Berlin, pp. 241-252, 2010.
"Multi-Platform Next-Generation Sequencing of the Domestic Turkey (Meleagris gallopavo): Genome Assembly and Analysis",
PLOS Biology, vol. e1000475, 2010.
"Sexy gene conversions: locating gene conversions on the X-chromosome",
Nucleic Acids Research, vol. 37, issue 14, pp. 4570 - 4579, 08/2009.
"Analysis of the fitness effect of compensatory mutations",
HFSP J., vol. 3, pp. 47-54, 2009.
"Analysis of the fitness effect of compensatory mutations",
J. Comput. Biol., 2008.
"Discrete Second Order Adjoints in Atmospheric Chemical Transport Modeling",
Jurnal of Computational Physics, vol. 227, no. 12, pp. 5949–5983, 2008.
"Housekeeping and tissue-specific genes differ in simple sequence repeats in the 5'-UTR region.",
Gene, vol. 407, no. 1-2, pp. 54-62, 2008.
Abstract
"Overlapping genes in the human and mouse genomes.",
BMC Genomics, vol. 9, pp. 169, 2008.
Abstract
"Performance comparison between k-tuple distance and four model-based distances in phylogenetic tree reconstruction.",
Nucleic Acids Res, vol. 36, no. 5, pp. e33, 2008.
Abstract
"Performance comparison of gene family clustering methods with expert curated gene family data set in Arabidopsis thaliana.",
Planta, vol. 228, no. 3, pp. 439-47, 2008.
Abstract
"Expression divergence of tandemly arrayed genes in human and mouse.",
Comp Funct Genomics, pp. 60964, 2007.
Abstract
"Note on the computation of critical effective population sizes",
J. Comput. Biol., vol. 14, pp. 950-960, 2007.
"Note on the computation of critical effective population sizes.",
J Comput Biol, vol. 14, no. 7, pp. 950-60, 2007.
Abstract
"Quantifying the major mechanisms of recent gene duplications in the human and mouse genomes: a novel strategy to estimate gene duplication rates.",
Genome Biol, vol. 8, no. 8, pp. R158, 2007.
Abstract
"Distinct patterns of SSR distribution in the Arabidopsis thaliana and rice genomes.",
Genome Biol, vol. 7, no. 2, pp. R14, 2006.
Abstract
"A roadmap of tandemly arrayed genes in the genomes of human, mouse, and rat.",
Mol Biol Evol, vol. 23, no. 11, pp. 2134-41, 2006.
Abstract
"Human SNPs reveal no evidence of frequent positive selection.",
Mol Biol Evol, vol. 22, no. 12, pp. 2504-7, 2005.
Abstract
"Patterns of segmental duplication in the human genome.",
Mol Biol Evol, vol. 22, no. 1, pp. 135-41, 2005.
Abstract
"Mammalian housekeeping genes evolve more slowly than tissue-specific genes.",
Mol Biol Evol, vol. 21, no. 2, pp. 236-9, 2004.
Abstract
"Does recombination shape the distribution and evolution of tandemly arrayed genes (TAGs) in the Arabidopsis thaliana genome?",
Genome Res, vol. 13, no. 12, pp. 2533-40, 2003.
Abstract
"Patterns of nucleotide substitution among simultaneously duplicated gene pairs in Arabidopsis thaliana.",
Mol Biol Evol, vol. 19, no. 9, pp. 1464-73, 2002.
Abstract
"Population genetics of duplicated disease-defense genes, hm1 and hm2, in maize (Zea mays ssp. mays L.) and its wild ancestor (Zea mays ssp. parviglumis).",
Genetics, vol. 162, no. 2, pp. 851-60, 2002.
Abstract
"Gene duplication and evolution.",
Science, vol. 293, no. 5535, pp. 1551, 2001.
"A survey of the molecular evolutionary dynamics of twenty-five multigene families from four grass taxa.",
J Mol Evol, vol. 52, no. 2, pp. 144-56, 2001.
Abstract